I'm not sure whether you have read this or not:"Because of a molecule's greater complexity, we can often construct a molecule that will give a particular spectrum, rather than having to just accept the spectra available as we do with atoms. This possibility arises because of the interdependence of molecular orbital energy level values for the molecule, molecular shape, bonding, and distribution of electron density within the molecule."
Also, I think it might have something to do with the recorder as well. You know, engineers might program the recorder in a way such that the data is convenient to use/read. Think about the trend the smooth curve reveals for further research (even though we have to be careful since there are invalid points on the graph, but what we need is the trend) since we do not fully understand quantum physics. Anyway, I did not have a chance to work on the aas machine though, so these are just my assumptions.