im really sorry to hear that vce2007!
that IS unfair. distance doesn't mean they meant any less to you.
(off the VCAA website)
Submitting your application
Students who believe they are eligible for a Derived Examination Score should first seek advice from their school. The primary responsibility for submitting a correctly completed application form rests with the student.
If circumstances are of an exceptionally private and sensitive nature, students may apply directly to the VCAA. Students will still be required to provide evidence in support of their application
Maybe you can try applying directly, if you feel it really has impacted on you. School doesn't know everything

good luck