Hi Charlieanne
10: 3D imaging software that displays the Quaternary structure of the protein.
A 3D model.
11: Well you must keep in mind all the different types of structures that a protein can have, such as hydrogen bonds, ionic bonds, Covalent bonds and possible hydrophobic Interactions.
All these factors could effect The structure of the Protein, this is because these bonds can change under different conditions, its these changes that could change the structure of the protein.
12: it enables us to fully understand how a wide range of proteins could effect the organism in positive and negative ways and increasing our knowledge of the different proteins in an organism only increases our understanding.
(first time answering question's i don't know if i'm 100% correct at all)